Less than a year after the events that transpired in the Macross 7 TV series, Basara leaves Fire Bomber and travels to the planet Zola. There, he meets a girl named Elma, who is a big fan of Fire Bomber. It is also on this planet where he must once again use his Spiritia powers; this time, to stop an army of poachers and Elma's father Graham from killing a group of space whales travelling within the planetary system.